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Free Sequences calculator - find sequence types, indices, sums and progressions step-by-step This website uses cookies to ensure you get the best experience. By using this website, you agree to our Cookie Policy.

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Run DNA Sequence Assembler v4 Please Paste the DNA/RNA Sequence: ssDNA, ssRNA, dsDNA, dsRNA. Sequence Length: bp, kb, Mb. Molecular Weight: Dalton, kDa  Name (not necessary): Nucleotide sequence without name: (case insensitive, disregarded all letters except: agctuswrymkhbdvn) gap simbols are: "nn nn",  Instructions.

We can rewrite the genetic code one base at a time. And this tool was actually built on a solver that's deployed routinely around the world for conventional 

Identify the Sequence for a set of data. Our simple and quick Calculator will help you to identify the sequence and see the step by step explanation after each calculation. DNA μg & pmol Converter. This tool converts micrograms of DNA and picomoles of DNA according to the following formula where N is the length of the DNA: First enter the length of the DNA fragment in bp, then enter the amountof DNA either in ug (Top) or in pmol (Bottom) and click on the 'Calculate' button to make the unit conversion: The Web Simply input your DNA polymerase, primer concentration and your primer sequence and the Tm Calculator will guide you to successful reaction conditions.

Dna sequence calculator

Enter the PCR template here (multiple templates are currently not supported). It is highly recommended to use refseq accession or GI (rather than the raw DNA sequence) whenever possible as this allows Primer-BLAST to better identify the template and thus perform better primer specificity checking.

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Dna sequence calculator

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Dna sequence calculator

Copy and paste the DNA sequence you want to analyze into the box.

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Dna sequence calculator





In the next step I would recommend to trim the alignment to the shortest sequence in the alignment and perform a DNA-distance matrix. There are multiple programs out there to do so, such as ARB

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DNA Melting Temperature (Tm) Calculator. Please Paste the DNA Sequence: DNA concentration: nM Salt concentration: mM Mg 2+ concentration: mM Tm: 0 C GC: % Length: bp

The program can be used to calculate single- or double stranded sequences, or the molecular weight of the complement of a sequence. RNA Sequence¶. RNA Sequence with secondary structure prediction methods. This tool takes a given sequence and returns the secondary structure prediction provided by 5 different tools: RNAfold, RNAsubopt, ipknot, contextfold and centroid_fold. Calculate the number of sequence alignments between two DNA or protein sequences m = length of the first sequence, n = length of the second sequence. The program calculates the number of possible alignments between n and m when m = n .

Programs for molecular biologists on zbio.net. Reverse Complement converts a DNA sequence into its reverse, complement, or reverse-complement counterpart. You may want to work with the reverse-complement of a sequence if it contains an ORF on the reverse strand. DNA calculations to convert µg to pmol for double-stranded and single-stranded DNA, convert micrograms of DNA to pmol ends, calculate vector:insert molar ratio and convert OD260 readings to µg/ml. Also calculate molarity of solutions, perform molar conversions, calculate dilutions and perform other calculations common in molecular biology labs. Calculator to help determine the reagents and sequencing runs needed to arrive at desired coverage for your experiment. I've got 14 aligned DNA sequences, and I'd like to know how many differences are between #1 and #2, #1 and #3, but in a table-like (or Excel-like) format, because I've already done the This calculation is based on the assumption that the average weight of a base pair (bp) is 650 Daltons.